BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014D04LP1|AL426675
(786 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1567 1553 0.0
>3x_Contig1567
Length = 11673
Score = 1553 bits (782), Expect = 0.0
Identities = 784/786 (99%)
Strand = Plus / Plus
Query: 1 gatctgctaatgggaactcaaccacactaatggcaggtgacactggaatcactgaaatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3672 gatctgctaatgggaactcaaccacactaatggcaggtgacactggaatcactgaaatag 3731
Query: 61 ttgataacctagtgttccataatcgataaatgatttgtcctaggagtaggataatattaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3732 ttgataacctagtgttccataatcgataaatgatttgtcctaggagtaggataatattaa 3791
Query: 121 aagtggaaatcatattcatattaggcctagcatggtattgcaacatcacaacagagagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3792 aagtggaaatcatattcatattaggcctagcatggtattgcaacatcacaacagagagcc 3851
Query: 181 aagtagctgcataatgtacaaaatagaataattggaaattcactcttctaatcctaggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3852 aagtagctgcataatgtacaaaatagaataattggaaattcactcttctaatcctaggta 3911
Query: 241 acgaagttacagcaatcataatgaaaagaagcatagccaagatgccccaaatgttagcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3912 acgaagttacagcaatcataatgaaaagaagcatagccaagatgccccaaatgttagcca 3971
Query: 301 atttcttcaacttggcaagtgcaccaatcctggcgtaataaaccgtataaagtatagtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3972 atttcttcaacttggcaagtgcaccaatcctggcgtaataaaccgtataaagtatagtat 4031
Query: 361 gcagaagcgactggaagacaacaattcttgaaatccatttatgcmagggtagcaatgcga 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4032 gcagaagcgactggaagacaacaattcttgaaatccatttatgcaagggtagcaatgcga 4091
Query: 421 gatataaaacatgcggcaaaggtgaaggccttgtcgttaaaaacaaaagcgctggcatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4092 gatataaaacatgcggcaaaggtgaaggccttgtcgttaaaaacaaaagcgctggcatca 4151
Query: 481 acgatacaggaatcctacccaaacgtttcgtaataagtacaagatcattgttgcmatcgt 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4152 acgatacaggaatcctacccaaacgtttcgtaataagtacaagatcattgttgcaatcgt 4211
Query: 541 ataacacaaacgcaaacgttatcacaccccaaaaggcagtgatttgcaatgcttcgttat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4212 ataacacaaacgcaaacgttatcacaccccaaaaggcagtgatttgcaatgcttcgttat 4271
Query: 601 ggtatattctggatctatggatccatgaaactctcttaaaagtatgatgccttaacctat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4272 ggtatattctggatctatggatccatgaaactctcttaaaagtatgatgccttaacctat 4331
Query: 661 gctccaatttaaagaaaaatggcctaagtttcaaatagttaatcaacggtatgaacaaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4332 gctccaatttaaagaaaaatggcctaagtttcaaatagttaatcaacggtatgaacaaca 4391
Query: 721 agataataactatcgatattatcaacacagcaagccccgaccgtcgtaccaaccgcaacc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4392 agataataactatcgatattatcaacacagcaagccccgaccgtcgtaccaaccgcaacc 4451
Query: 781 ttattg 786
||||||
Sbjct: 4452 ttattg 4457
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5608
Number of Sequences: 1807
Number of extensions: 5608
Number of successful extensions: 25
Number of sequences better than 1.0e-20: 1
length of query: 786
length of database: 10,358,551
effective HSP length: 16
effective length of query: 770
effective length of database: 10,329,639
effective search space: 7953822030
effective search space used: 7953822030
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)